mirror of
https://gitlab.alpinelinux.org/alpine/aports.git
synced 2026-03-28 00:42:25 +01:00
37 lines
1.0 KiB
Plaintext
37 lines
1.0 KiB
Plaintext
# Contributor: Charles Pritchard <chuck@jumis.com>
|
|
# Maintainer: Charles Pritchard <chuck@jumis.com>
|
|
pkgname=py3-biopython
|
|
pkgver=1.84
|
|
pkgrel=0
|
|
pkgdesc="Python tools for computational molecular biology."
|
|
options="!check" # test_NCBI_qblast hangs
|
|
url="https://biopython.org/"
|
|
arch="all"
|
|
license="BSD-3-Clause"
|
|
depends="py3-numpy python3"
|
|
makedepends="py3-gpep517 py3-setuptools py3-wheel py3-numpy-dev python3-dev"
|
|
subpackages="$pkgname-pyc"
|
|
source="https://files.pythonhosted.org/packages/source/b/biopython/biopython-$pkgver.tar.gz"
|
|
builddir="$srcdir/biopython-$pkgver"
|
|
|
|
build() {
|
|
gpep517 build-wheel \
|
|
--wheel-dir .dist \
|
|
--output-fd 3 3>&1 >&2
|
|
}
|
|
|
|
check() {
|
|
python3 -m venv --clear --without-pip --system-site-packages .testenv
|
|
.testenv/bin/python3 -m installer .dist/*.whl
|
|
.testenv/bin/python3 -m unittest
|
|
}
|
|
|
|
package() {
|
|
python3 -m installer -d "$pkgdir" \
|
|
.dist/*.whl
|
|
}
|
|
|
|
sha512sums="
|
|
cadf82959626b2b9f4482757d95d7c4db262d3e1e4a007567a2ed7f1f4114a0d6543886a4971dffbe0ff43579aa7e0c3b7132d8b5e58022e8ddf0b13dbf07f52 biopython-1.84.tar.gz
|
|
"
|