testing/suitesparse: new abuild

http://faculty.cse.tamu.edu/davis/suitesparse.html
A collection of sparse matrix libraries

testing/suitesparse/0001-exclude-metis.patch

@@ -0,0 +1,28 @@
+From: Jakub Jirutka <jakub@jirutka.cz>
+Date: Wed, 08 Jun 2016 21:04:00 +0200
+Subject: [PATCH] Do not install METIS
+
+METIS is optional (and not needed for Julia), but `make install` fails when
+it's not built, so we must remove it from Makefile.
+--- a/Makefile
++++ b/Makefile
+@@ -56,19 +56,6 @@
+ #	( cd SKYLINE_SVD && $(MAKE) install )
+ 	$(CP) README.txt $(INSTALL_DOC)/SuiteSparse_README.txt
+ 	chmod 644 $(INSTALL_DOC)/SuiteSparse_README.txt
+-ifeq (,$(MY_METIS_LIB))
+-        # install METIS from SuiteSparse/metis-5.1.0
+-	- $(CP) lib/libmetis.* $(INSTALL_LIB)
+-	- $(CP) metis-5.1.0/manual/manual.pdf $(INSTALL_DOC)/METIS_manual.pdf
+-	- $(CP) metis-5.1.0/README.txt $(INSTALL_DOC)/METIS_README.txt
+-        # the following is needed only on the Mac, so *.dylib is hardcoded:
+-	$(SO_INSTALL_NAME) $(INSTALL_LIB)/libmetis.dylib $(INSTALL_LIB)/libmetis.dylib
+-	- $(CP) include/metis.h $(INSTALL_INCLUDE)
+-	chmod 755 $(INSTALL_LIB)/libmetis.*
+-	chmod 644 $(INSTALL_INCLUDE)/metis.h
+-	chmod 644 $(INSTALL_DOC)/METIS_manual.pdf
+-	chmod 644 $(INSTALL_DOC)/METIS_README.txt
+-endif
+ 
+ # uninstall all packages
+ uninstall:

testing/suitesparse/0002-remove-rpath.patch

@@ -0,0 +1,17 @@
+From: Jakub Jirutka <jakub@jirutka.cz>
+Date: Wed, 08 Jun 2016 21:04:00 +0200
+Subject: [PATCH] Do not use -rpath
+
+Hard-coded rpath is bad, moreover when it contains absolute path to the
+build directory.
+--- a/SuiteSparse_config/SuiteSparse_config.mk
++++ b/SuiteSparse_config/SuiteSparse_config.mk
+@@ -338,7 +338,7 @@
+ 
+     ifeq ($(UNAME),Linux)
+         # add the realtime library, librt, and SuiteSparse/lib
+-        LDLIBS += -lrt -Wl,-rpath=$(INSTALL_LIB)
++        LDLIBS += -lrt
+     endif
+ 
+     #---------------------------------------------------------------------------

testing/suitesparse/APKBUILD

@@ -0,0 +1,60 @@
+# Contributor: Jakub Jirutka <jakub@jirutka.cz>
+# Maintainer: Jakub Jirutka <jakub@jirutka.cz>
+pkgname=suitesparse
+_pkgname=SuiteSparse
+pkgver=4.5.3
+pkgrel=0
+pkgdesc="A collection of sparse matrix libraries"
+url="http://faculty.cse.tamu.edu/davis/suitesparse.html"
+arch="x86 x86_64"
+license="GPL"
+depends_dev="openblas-dev"
+makedepends="$depends_dev"
+subpackages="$pkgname-dev $pkgname-doc"
+source="http://faculty.cse.tamu.edu/davis/$_pkgname/$_pkgname-$pkgver.tar.gz
+	0001-exclude-metis.patch
+	0002-remove-rpath.patch
+	"
+builddir="$srcdir/$_pkgname"
+
+prepare() {
+	cd "$builddir"
+
+	# OpenBLAS provides also LAPACK.
+	export LAPACK="-lopenblas"
+
+	# gcc fails on internal error when using default -O3.
+	export OPTIMIZATION="-O2"
+
+	# Do not include the Partition module and METIS (it's optional and
+	# Julia doesn't need it).
+	export CFLAGS="$CFLAGS -DNPARTITION"
+	rm -r metis-*
+
+	default_prepare
+}
+
+build() {
+	cd "$builddir"
+
+	make library
+}
+
+package() {
+	cd "$builddir"
+
+	make install \
+		INSTALL="$pkgdir/usr" \
+		INSTALL_INCLUDE="$pkgdir/usr/include/$pkgname" \
+		INSTALL_DOC="$pkgdir/usr/share/doc/$pkgname"
+}
+
+md5sums="8ec57324585df3c6483ad7f556afccbd  SuiteSparse-4.5.3.tar.gz
+308b4f96e82d7f5c92335ca6c7c74251  0001-exclude-metis.patch
+ce5696f96435db0125ac1815888fb7f6  0002-remove-rpath.patch"
+sha256sums="6199a3a35fbce82b155fd2349cf81d2b7cddaf0dac218c08cb172f9bc143f37a  SuiteSparse-4.5.3.tar.gz
+06f825ed80f73c30d71439650b951ea835a6139fe2e30078ed155fdecc7606ab  0001-exclude-metis.patch
+4db04c59039e9fe50f75d00fb662eaffbd76ede498ff8ec8858b697df2679e32  0002-remove-rpath.patch"
+sha512sums="88a5ba6c70e4d66751d1ac32fd8998cde11509e7b034814c34757180db70ce2838ebb77fd7c617bf96e473214c70ccbdd0064b4f5e4dd69ae4c51dfeb9696496  SuiteSparse-4.5.3.tar.gz
+aa2d62a371eefb33f0c81d3f7b50cf36e76c4f010fb5bb424e5e7344a1921cb6a430742ebb92df42cef587ec46ad8d2b777d3d9a62eb4a128e02bee8ad5de272  0001-exclude-metis.patch
+cd40b696515b26c95298b435a5111e582dc42c2fa2e8ef9889558467d375b1d19452838b9463df66958e73ddb0c8c0191936e3e952586a3c7d345edb08fa7e62  0002-remove-rpath.patch"